campsis

Requirements

• R package campsismod must be installed beforehand
• Simulation engine must be installed too (rxode2 or mrgsolve)

Installation

From CRAN

Install the latest official release from CRAN:

install.packages("campsis")

From GitHub

Install the latest development version from GitHub:

# remotes::install_github("campsisverse/campsis")
install.packages("campsis", repos = c('https://campsisverse.r-universe.dev', 'https://cloud.r-project.org'))

Basic example

Import the campsis package:

library(campsis)

Create your dataset:

ds <- Dataset(50) %>%
  add(Bolus(time = 0, amount = 1000, ii = 12, addl = 2)) %>%
  add(Observations(times = seq(0, 36, by = 0.5)))

Load your own model or use a built-in model from the library:

model <- model_suite$pk$`2cpt_fo`

Simulate your results with your preferred simulation engine (rxode2 or mrgsolve):

results <- simulate(model = model, dataset = ds, dest = "mrgsolve", seed = 1)

Plot your results:

shaded_plot(results, "CONC")